Fenugreek as a Potential Antiviral Agent against Crimean-Congo Hemorrhagic Fever Virus: an In-depth Theoretical Analysis
Fenugreek as a Potential Antiviral Agent Against Crimean-Congo Hemorrhagic Fever Virus
DOI:
https://doi.org/10.29356/jmcs.v69i4.2384Keywords:
Fever, diosgenin, tigogenone, vicenin, antiviralAbstract
Abstract. Fenugreek is widely known for its important medicinal, nutritional, and culinary applications, offering antipyretic, anti-inflammatory, and antiviral effects. Its antiviral properties make it particularly interesting for addressing viruses like Crimean-Congo Hemorrhagic Fever Virus (CCHFV). Given the lack of approved treatments for CCHFV and the virus's high fatality rate, it demands urgent attention. The nucleoprotein of CCHFV, a critical factor in the virus's replication process, has been identified as a promising target for the development of antiviral therapies. This study aimed to discover inhibitors of this protein through virtual screening. A combination of docking studies and molecular dynamics simulations was employed to screen active compounds from fenugreek for their ability to inhibit the nucleoprotein. Given that CCHFV is classified as a biosafety level-4 pathogen by the World Health Organization (WHO), making it difficult to study in conventional laboratories, in-silico methods provide a safe and efficient alternative for identifying potential inhibitors. Based on the results of molecular docking and dynamic simulations, Diosgenin, Tigogenone, and Vicenin-2 are proposed as potential inhibitors of the CCHFV nucleoprotein. These findings suggest that fenugreek constituents could be promising leads in the development of antiviral therapies for CCHFV.
Resumen. El fenogreco (Trigonella foenum-graecum) es conocido por sus importantes aplicaciones medicinales, nutricionales y culinarias, ofreciendo efectos antipiréticos, antiinflamatorios y antivirales. Estas últimas lo hacen particularmente interesante para enfrentar virus como el de la Fiebre Hemorrágica de Crimea-Congo (CCHFV, por sus siglas en inglés). Dada la ausencia de tratamientos aprobados para el CCHFV y su alta tasa de mortalidad, se requiere una atención urgente. La nucleoproteína del CCHFV, un factor crítico en el proceso de replicación del virus ha sido identificada como un objetivo prometedor para el desarrollo de terapias antivirales. Este estudio tuvo como objetivo descubrir inhibidores de esta proteína mediante cribado virtual. Se empleó una combinación de estudios de acoplamiento molecular y simulaciones de dinámica molecular para evaluar la capacidad de compuestos activos del fenogreco para inhibir la referida nucleoproteína. Dado que el CCHFV está clasificado por la Organización Mundial de la Salud (OMS) como un patógeno de nivel de bioseguridad 4, se dificulta su estudio en laboratorios convencionales, por lo que los métodos in silico ofrecen una alternativa segura y eficiente para la identificación de posibles inhibidores. Con base en los resultados del acoplamiento molecular y las simulaciones dinámicas, se proponen a la diosgenina, la tigogenona y la vicenina-2 como posibles inhibidores de la nucleoproteína del CCHFV. Estos hallazgos sugieren que los componentes del fenogreco podrían constituir candidatos prometedores en el desarrollo de terapias antivirales contra el CCHFV.
Downloads
References
1. Srinivasan, K. Food Rev. Int. 2006 22, 203. DOI: http://dx.doi.org/10.1080/87559120600586315. DOI: https://doi.org/10.1080/87559120600586315
2. Al‐Habori, M.; Raman, A., in: Phytotherapy Research: An International Journal Devoted to Pharmacological and Toxicological Evaluation of Natural Product Derivatives. 1998 12, 233 DOI: https://doi.org/10.1002/(SICI)1099-1573(199806)12:4<233::AID-PTR294>3.0.CO;2-V
3. Smith, M. Alternative Medicine Review. 2003 8, 20 DOI: https://doi.org/10.1044/leader.FTR2.08202003.6
4. Sun, W.; Shahrajabian, M. H.; Cheng, Q. Mini Rev. Med. Chem. 2021 21, 724. DOI: http://dx.doi.org/10.2174/1389557520666201127104907. DOI: https://doi.org/10.2174/1389557520666201127104907
5. Singletary, K. W. Nutr. Today. 2017, 52, 93. DOI: https://doi.org/10.1097/NT.0000000000000209
6. Aboubakr, H. A.; Nauertz, A.; Luong, N. T.; Agrawal, S.; El-Sohaimy, S. A.; Youssef, M. M.; Goyal, S. M. J. Food Prot. 2016, 79, 1001. DOI: http://dx.doi.org/10.4315/0362-028X.JFP-15-593. DOI: https://doi.org/10.4315/0362-028X.JFP-15-593
7. Alu'datt, M. H.; Rababah, T.; Al‐ali, S.; Tranchant, C. C.; Gammoh, S.; Alrosan, M.; Kubow, S.; Tan, T. C.; Ghatasheh, S. J. Food Sci. 2024, 89, 1835 DOI: https://doi.org/10.1111/1750-3841.16970
8. Salam, S. G. A.; Rashed, M. M.; Ibrahim, N. A.; Rahim, E. A. A.; Aly, T. A. A.; Al-Farga, A. Sci. Rep. 2023, 13, 7032. DOI: http://dx.doi.org/10.1038/s41598-023-31888-y. DOI: https://doi.org/10.1038/s41598-023-31888-y
9. Haxhiraj, M.; White, K.; Terry, C. Int. J. Mol. Sci. 2024, 25, 6987. DOI: http://dx.doi.org/10.3390/ijms25136987. DOI: https://doi.org/10.3390/ijms25136987
10. Agrawal, S.; Sanap, S. N.; Bisen, A. C.; Biswas, A.; Choudhury, A. D.; Verma, S. K.; Jaiswal, S.; Narender, T.; Bhatta, R. S. Bioanalysis. 2023, 15, 711. DOI: http://dx.doi.org/10.4155/bio-2023-0074. DOI: https://doi.org/10.4155/bio-2023-0074
11. Ahmad, I.; Kuznetsov, A. E.; Pirzada, A. S.; Alsharif, K. F.; Daglia, M.; Khan, H. Front. Chem. 2023, 11, 1145974. DOI: http://dx.doi.org/10.3389/fchem.2023.1145974. DOI: https://doi.org/10.3389/fchem.2023.1145974
12. Konstantinidis, N.; Franke, H.; Schwarz, S.; Lachenmeier, D. W. Molecules. 2023, 28, 3460. DOI: http://dx.doi.org/10.3390/molecules28083460. DOI: https://doi.org/10.3390/molecules28083460
13. Arya, P.; Munshi, M.; Kumar, P. Food Chemistry Advances. 2023, 2, 100170. DOI: https://doi.org/10.1016/j.focha.2022.100170
14. Aghababaei, F.; Hadidi, M. Pharmaceuticals. 2023, 16, 1020. DOI: http://dx.doi.org/10.3390/ph16071020. DOI: https://doi.org/10.3390/ph16071020
15. Whitehouse, C. A. Antiviral Res. 2004, 64, 145. DOI: http://dx.doi.org/10.1016/j.antiviral.2004.08.001. DOI: https://doi.org/10.1016/j.antiviral.2004.08.001
16. Elaldi, N.; and Kaya, S. J. Med. Microbiol. Infect. Dis. 2014, 4, 1. DOI: https://doi.org/10.5799/ahinjs.02.2014.S1.0135
17. Swanepoel, R.; Gill, D. E.; Shepherd, A. J.; Leman, P. A.; Mynhardt, J. H.; Harvey, S. Rev. Infect. Dis. 1989, 11, Suppl 4, S794. DOI: http://dx.doi.org/10.1093/clinids/11.supplement_4.s794. DOI: https://doi.org/10.1093/clinids/11.Supplement_4.S794
18. Deyde, V. M.; Khristova, M. L.; Rollin, P. E.; Ksiazek, T. G.; Nichol, S. T. J. Virol. 2006, 80, 8834. DOI: http://dx.doi.org/10.1128/JVI.00752-06. DOI: https://doi.org/10.1128/JVI.00752-06
19. Kumar Panja, S.; Kumar, S.; Fazal, A. D.; Bera, S. J. Photochem. Photobiol. A Chem. 2023, 445, 115084. DOI: http://dx.doi.org/10.1016/j.jphotochem.2023.115084. DOI: https://doi.org/10.1016/j.jphotochem.2023.115084
20. Kumar Panja, S.; and Kumar, S. J. Mol. Liq. 2023, 375, 121354. DOI: http://dx.doi.org/10.1016/j.molliq.2023.121354. DOI: https://doi.org/10.1016/j.molliq.2023.121354
21. Kumar, S.; Prajapat, A.; Panja, S. K.; Shukla, M., in: Green Chemical Synthesis with Microwaves and Ultrasound. 2024, 1. DOI: https://doi.org/10.1002/9783527844494.ch1
22. Kumar Sada, P.; Kaur Jassal, A.; Bar, A.; Kumar, P.; Srikrishna, S.; Kumar, S.; Kumar Singh, A.; Lee, Y.; Singh, L.; Rai, A. Microchem. J. 2024, 207, 111710. DOI: http://dx.doi.org/10.1016/j.microc.2024.111710. DOI: https://doi.org/10.1016/j.microc.2024.111710
23. Panja, S. K.; Kumar, S.; Haddad, B.; Patel, A. R.; Villemin, D.; Amine, H.-M.; Bera, S.; Debdab, M. Physchem. 2024, 4, 369. DOI: http://dx.doi.org/10.3390/physchem4040026. DOI: https://doi.org/10.3390/physchem4040026
24. Srivastava, S.; Kumar, S.; Sharma, P. K.; Rustagi, S.; Mohanty, A.; Donovan, S.; Henao-Martinez, A. F.; Sah, R.; Franco-Paredes, C. Health Sci. Rep. 2024, 7, e70053. DOI: http://dx.doi.org/10.1002/hsr2.70053. DOI: https://doi.org/10.1002/hsr2.70053
25. Kiefer, F.; Arnold, K.; Kunzli, M.; Bordoli, L.; Schwede, T. Nucleic Acids Res. 2009 37, D387. DOI: http://dx.doi.org/10.1093/nar/gkn750. DOI: https://doi.org/10.1093/nar/gkn750
26. Waterhouse, A.; Bertoni, M.; Bienert, S.; Studer, G.; Tauriello, G.; Gumienny, R.; Heer, F. T.; de Beer, T. A. P.; Rempfer, C.; Bordoli, L.; Lepore, R.; Schwede, T. Nucleic Acids Res. 2018, 46, W296. DOI: http://dx.doi.org/10.1093/nar/gky427. DOI: https://doi.org/10.1093/nar/gky427
27. Madeira, F.; Madhusoodanan, N.; Lee, J.; Eusebi, A.; Niewielska, A.; Tivey, A. R. N.; Lopez, R.; Butcher, S. Nucleic Acids Res. 2024, 52, W521. DOI: http://dx.doi.org/10.1093/nar/gkae241. DOI: https://doi.org/10.1093/nar/gkae241
28. Muhamad, F.; Ahmad, R. B.; Asi, S.; Murad, M. N. J. Phys. Conf. Ser. 2018, 1019, 012085. DOI: https://doi.org/10.1088/1742-6596/1019/1/012085
29. Kumar, S., J. Serb. Chem. Soc. 2023 88, 381 DOI: http://dx.doi.org/10.2298/jsc220921087k. DOI: https://doi.org/10.2298/JSC220921087K
30. Kumar, S.; and Panja, S. K. Theor. Chem. Acc. 2023, 142, 126. DOI: http://dx.doi.org/10.1007/s00214-023-03073-x. DOI: https://doi.org/10.1007/s00214-023-03073-x
31. Trott, O.; and Olson, A. J. J. Comput. Chem. 2010, 31, 455. DOI: http://dx.doi.org/10.1002/jcc.21334. DOI: https://doi.org/10.1002/jcc.21334
32. Berendsen, H. J.; van der Spoel, D.; van Drunen, R. Comput. Phys. Commun. 1995, 91, 43. DOI: https://doi.org/10.1016/0010-4655(95)00042-E
33. Mark, P.; and Nilsson, L. J. Phys. Chem. A. 2001, 105, 9954. DOI: https://doi.org/10.1021/jp003020w
34. Kumar, V.; Kumar, R.; Kumar, N.; Kumar, S. Asian J. Chem. 2023, 35, 991. DOI: http://dx.doi.org/10.14233/ajchem.2023.27594. DOI: https://doi.org/10.14233/ajchem.2023.27594
35. Ergonul, O. Curr. Opin. Virol. 2012, 2, 215. DOI: http://dx.doi.org/10.1016/j.coviro.2012.03.001. DOI: https://doi.org/10.1016/j.coviro.2012.03.001
36. Frank, M. G.; Weaver, G.; Raabe, V. Emerg. Infect. Dis. 2024, 30, 847. DOI: http://dx.doi.org/10.3201/eid3005.231646. DOI: https://doi.org/10.3201/eid3005.231646
37. Tewari, A.; Singh, R.; Brar, J. K. J. Phytopharm. 2024, 13, 97. DOI: http://dx.doi.org/10.1016/j.sajb.2022.04.014. DOI: https://doi.org/10.1016/j.sajb.2022.04.014
38. Contreras-Garcia, J.; Johnson, E. R.; Keinan, S.; Chaudret, R.; Piquemal, J. P.; Beratan, D. N.; Yang, W. J. Chem. Theory Comput. 2011, 7, 625. DOI: http://dx.doi.org/10.1021/ct100641a. DOI: https://doi.org/10.1021/ct100641a
Downloads
Additional Files
Published
Issue
Section
License
Copyright (c) 2025 Sumit Kumar, Ravindra Kumar, Nagendra Kumar

This work is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License.
Authors who publish with this journal agree to the following terms:
- Authors retain copyright and grant the journal right of first publication with the work simultaneously licensed under a Creative Commons Attribution License that allows others to share the work with an acknowledgement of the work's authorship and initial publication in this journal.
- Authors are able to enter into separate, additional contractual arrangements for the non-exclusive distribution of the journal's published version of the work (e.g., post it to an institutional repository or publish it in a book), with an acknowledgement of its initial publication in this journal.






